red - IUCN Redlisting Tools
Includes algorithms to facilitate the assessment of extinction risk of species according to the IUCN (International Union for Conservation of Nature, see <https://www.iucn.org/> for more information) red list criteria.
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biodiversityextinction-risk
4.90 score 1 stars 2 dependents 33 scripts 517 downloads
gecko - Geographical Ecology and Conservation Knowledge Online
Includes a collection of geographical analysis functions aimed primarily at ecology and conservation science studies, allowing processing of both point and raster data. Now integrates SPECTRE (<https://biodiversityresearch.org/spectre/>), a dataset of global geospatial threat data, developed by the authors.
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conservation-scienceecologyspatial-analysis
3.88 score 5 stars 1 dependents 5 scripts 604 downloads
arete - Automated REtrieval from TExt
A Python based pipeline for extraction of species occurrence data through the usage of large language models. Includes validation tools designed to handle model hallucinations for a scientific, rigorous use of LLM. Currently supports usage of GPT with more planned, including local and non-proprietary models. For more details on the methodology used please consult the references listed under each function, such as Kent, A. et al. (1995) <doi:10.1002/asi.5090060209>, van Rijsbergen, C.J. (1979, ISBN:978-0408709293, Levenshtein, V.I. (1966) <https://nymity.ch/sybilhunting/pdf/Levenshtein1966a.pdf> and Klaus Krippendorff (2011) <https://repository.upenn.edu/handle/20.500.14332/2089>.
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ecologylarge-language-modelswildlife-conservation
3.70 score 1 stars 3 scripts 217 downloads